Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQDFSSLLLKLQEYWKDQGCLVIQPYDIP---------AGAGT--FHPATLLRSLDKKPW-NVAYVAPSRRPTD----GRYGENPNRLGSYYQFQVVIKPSPSN----------IQELYLKSLEVLGINLNEHDIRFVEDNWESPTLGAWGLGWEVWLDGMEVTQFTYFQQVG---------G---IPCSPIPVEITYGLERLTMYVQKVENILEIEWAKKDNESVRYAQVHLESEYEFSKYHFEVASVERLLEMFKNAQAEALHCLENKLPLPAYDLVMLCSHFFNILDARKAISVAERQNYILQIRDLAKGCAVLYKEQEEEREERLKNALTKA |
| 3WQY Chain:A ((60-267)) | -FELDEMREYYLNFFERRGHGRIERYPVVARWRTDIYLTIASIADFQPFVT-SGVAPPPANPLTISQPCIRLDDLDSVGRTG------RHLTLFEMMAHHAFNYPGKEIYWKNETVAYCTELLNELGVKKE--DIVYKEEPWAG--GGNAGPCLEAIVGGLEVATLVFMNLEEHPEGDIEIKGARYRKMDNYIVDTGYGLERFVWASKGTPTVYDAIFPEVVDTIIDNSNVSFNREDERVRRIVAESSKLAGIMGELRGERLNQLRKSVADTVGVSVEELEGIVVPLEKVYSLADHTRCILFMLGDGLVPSNAGAGYLARLMIRRSLRLAEELELG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WQY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79424 for 1244 contacts (-63.8/contact) +
2D Compatibility (PS) -18417 + (NN) -4585 + (LL) 524
1D Compatibility (HY) -6000 + (ID) 1700
Total energy: -109602.0 ( -88.10 by residue)
QMean score : 0.391
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