Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------MTNEEMQVLLLMINNKKG---NLRPSHKEFLQECL-----------------IEAVLHNKNINKTTEYAIRNNIAHLPINKTEGFLVRT-------YNHSLGIFNENIAEKLKIPKKEKEILQ----PLNANEK--QVLNTALENNEIDARTFKPWDLGSKEASKENASMSEELTQ-NNSKLSHFN------ENSIAQ------------NSVGQNNVKEPNTKSNNSKQNHSLSNSD---------------------------LTSNTDYNKLVADMFENQMDANGNYIGKKFSTQAYDNKTPYKVATGNASEYSSYLYSKKTKSKDIGMER----- |
| 4K7J Chain:A ((26-375)) | GLLTDYGNASASPWMKKLQSVAQGSGETFRILQIGDSHTAGDFFTDSLRKRLQKTWGDGGIGWVYPANVKGQRMAAVRHNGNWQSLT---SRNNTGDFPLG---GILAHTGSGGSMTLTASDGIASKQRVSLFAKPLLAEQTLTVNGNTVSANGGGWQVLDTGAALP-LTIHTEMPWDIGFINIENPAGGITVSAMGINGAQLTQWSKWRADRMNDLAQTGADLVILSYGTNEAFNNNIDIADTEQKWLDTVRQIRDSLPAAGILIIGAPESLKNTLGVCGTRPVRLTEVQQMQRRVARQGQTMFWSWQNAMGGICSMKNWLNQGW---AAKDGVHFSAKGYRRAAEMLADSLEELVRSA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K7J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 84943 for 1680 contacts (50.6/contact) +
2D Compatibility (PS) -25040 + (NN) 5534 + (LL) 1012
1D Compatibility (HY) -5600 + (ID) 2800
Total energy: 58049.0 ( 34.55 by residue)
QMean score : 0.023
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