Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAVSSINQFDSNLYGLLNAKSAPKEDLAPIEGAEKIEREKKDAPTENLPFNPDKRETYGFLVLELMSDREYEAFLRATAGMDESQKRLAAQSLYSLTDFYNGKFSKEVENAPKQPVNGLHKKAFQTFNATNHNAFLQRYQNAYNNPSSMDVVL |
| 1MW9 Chain:X ((297-313)) | ------------------------------------------------------------------------------LGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNMVRGYISDNFGKKYLPESPNQYAREAIRPSDVNVMAES |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1MW9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 2034 for 65 contacts (31.3/contact) +
2D Compatibility (PS) -1937 + (NN) -1293 + (LL) 4916
1D Compatibility (HY) -1600 + (ID) 250
Total energy: 1870.0 ( 28.77 by residue)
QMean score : 0.578
|
|
|