Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFNKVIMVGRLTRNVELKYLPSGSAAATIGLATSRRFKKQDGTLGEEVCFIDARLFGRTAEIANQYLSKGSSVLIEGRLTYESWMDQTGKKNSRHTITADSLQFMDKKSDNPQANSMQDSMTHENFNNAYPTNYNAPSQDPFSQAQSYPQNAYTKENSQAQPSKYQNSVPEINIDEEEIPF
2VW9 Chain:B ((1-106))
MFNKVIMVGRLTRNVELKYLPSGSAAATIGLATSRRFKKQDGTLGEEVCFIDARLFGRTAEIANQYLSKGSSVLIEGRLTYESWMDQTGKKNSRHTITADSLQFMD---------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2VW9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22224 for 775 contacts (-28.7/contact) +
2D Compatibility (PS) -11324 + (NN) -1899 + (LL) 2544
1D Compatibility (HY) -14000 + (ID) 5250
Total energy: -52153.0 ( -67.29 by residue)
QMean score : 0.542
(partial model without unconserved sides chains):
PDB file :
Tito_2VW9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VW9-query.scw
PDB file :
Tito_Scwrl_2VW9.pdb
: