Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIDKFLQSVGLVKRRVLATDMCNVGAVWLNGSCA-KPSKEVKTGDVISLHYLKGIEEYTILQIPTLKNVPRKDTHLYIAPKTKE
3J7A Chain:E ((107-164))
RRLQTKVFKLGLAKSVHHARVLIRQRHIRVGKQMVDIPSFLVRVDSEKHIDFATTSPFGGARPGRVKRKSLKKQKEKTEA-----
General information:
TITO was launched using:
RESULT:
Template:
3J7A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42528 for 372 contacts (-114.3/contact) +
2D Compatibility (PS) -5789 + (NN) 641 + (LL) 644
1D Compatibility (HY) -400 + (ID) 400
Total energy: -47832.0 ( -128.58 by residue)
QMean score : 0.500
(partial model without unconserved sides chains):
PDB file :
Tito_3J7A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J7A-query.scw
PDB file :
Tito_Scwrl_3J7A.pdb
: