Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDYKRFKGKHANIVIEIISLLEKGVKKAQEILEKPDAG---SYTQLENSSGDTPIKADLALDKFLEETFLSLENVKSVFSEEKETPVT---KENGSYLIAYDPLDGSSVMEANFLVGTIIGVYEKDYK-----------AQNLVASLYVVFGHKIELVVAL-EEVYRYAFY-Q-NKFHFI-ETIVLENKGKIIAS-GGNQKDFSLGLKKALEGFF-----AENYRLRYSGSMVADVHHVLVKKGGM---FSY---PQKKLRKLFEVFPLALMVEKAKGEAFYFDKGVKKRLLDQSVESYHEKSECYLASPHEAQILEKHLKGE |
| 2FHY Chain:A ((60-370)) | ------KARGTGELTQLLNSLCTAVKAISSAVRKAGIAHLYGIAGS---------KLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDPLDGSSNIDCLVSVGTIFGIYRKKSTDEPSEKDALQPGRNLVAAGYALYGSATMLVLAMDCGVNCFMLDPAIGEFILVDKDVKIKKKGKIYSLNEGYAKDFDPAVTEYIQRKKFPPDNSAPYGARYVGSMVADVHRTLVYG-GIFLYPANKKSPNGKLRLLYECNPMAYVMEKAGGMAT---TGK-EAVLDVIPTDIHQRAPVILGSPDDVLEFLKVYEKH |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FHY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144496 for 2224 contacts (-65.0/contact) +
2D Compatibility (PS) -29243 + (NN) -12101 + (LL) 396
1D Compatibility (HY) -16800 + (ID) 4050
Total energy: -206294.0 ( -92.76 by residue)
QMean score : 0.436
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