Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VNNPKPCEWKSNELSRGYIADYKAFNFVDGEGVRCSLYVSGCPFHCEGCYNKAAQSFKY---GKPYTKELEDD----ILKD-IGH-------------ESVQGLTL-LGGEPFLNTATCLSIVKRIRATYGETKDIWSWTGYTWDEMMQETADKLE--LLSLIDVLVDGRFEQKLFDPNLAF-RGSSNQRIIDVQKSLAAGEVVLYEL |
| 2YX0 Chain:A ((78-246)) | --------------------------------------LAWCTHNCIFCWRPMENFLGTELPQPWDDPAFIVEESIKAQRKLLIGYKPKVDKKKFEEAWNPTHAAISLSGEPMLYPY-MGDLVEEFHKR-GF-TTFIVTNGTIPER-LEE--MIKEDKLPTQLYVSITAPDIE-TYNSVNIPMIPDGWERILRFLELMRDLPTRTV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YX0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27476 for 906 contacts (-30.3/contact) +
2D Compatibility (PS) -14995 + (NN) -5167 + (LL) 2524
1D Compatibility (HY) -2800 + (ID) 850
Total energy: -48764.0 ( -53.82 by residue)
QMean score : 0.296
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