Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKLTKGLGILLASSLVLGLAACGGGSDDKALSTEKITIGTTAGPHQQIAEEVQKLAKKDGLEIKIKTFDDYNTPNTALNDGDLDANNYQTIPFLEQQKKDKGYKLDVAFKTVAFPMGIYSNDIKDLKNLKKGDKIAVPNDPSNEYRGLKLFEDAGVIKLKDGVEEKATKKDIAENPLDLEIVELEASQIPAQLDEVAAAAINTNFAMGAGLSINKDAIYHEPTKDNP---YPNVFVVRSANKDDEVVKTLEKYYHSDEVKAFIEKEFNGSVVPAF |
4IB2 Chain:B ((10-250)) | ---------------------------------AKTIKVAASATPHAEILEQAKSILKKEGYQLEVTVFDDYVQPNEVVESGEFDANYFQHVPYLESFNEEKGTHLVDAGDIHYEPFGIYPGTKKSLDEISEGDKIAVPNDTTNEARALLLLQDNGIITLKDGAGLNATVNDIEENPYNVEIVELEAAQVARVTGETAYVVLNGNYALEAGYSVAKDALAYEKSDSEAAKTYVNIIAVKEGNEKEEKIQALVKALKSDEIKEYIEKTYDGAVIP-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4IB2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -54768 for 2033 contacts (-26.9/contact) +
2D Compatibility (PS) -25688 + (NN) -10354 + (LL) 1932
1D Compatibility (HY) -16000 + (ID) 4900
Total energy: -109778.0 ( -54.00 by residue)
QMean score : 0.562
|
|
|