Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDEKEKNLNENSENESTPKREVEDTLHTPESAQPVQETPIVEGVTPEGEKFAGATEDAAEASSTNAFFEEASNKESEPARPAPGPRRAGTTGGGAVPPNRVNNGGSGNGNGEPPKRGKHFIGYFLTALIGVIIGGLIIFFVAWDNGDNADTTSNSNNKATKVEKVSVDTTSDVTKAVDKVQDAVVSVLNYQSSSSLDGTTTSEQEASSGSGVIYKKANGKAYIVTNNHVVADANKLEVTFTNGKKSEAKLLGTDEWNDLAVLEIDDKNVTTVAAFGDSDSLKLGEPAIAIGSPLGTEFSG--SVTQGIISGLNRAVPVDTNGDGTEDWEADVIQTDAAINPGNSGGALINIEGQVIGINSMKISME--NVEGISFAIPSNTVEPIIEQLETKGEVERPSLGVSLRDVDTIPETQQKNILKLPDSVDYGAMVQQVVSGSAADKAGLKQYDVIVELNGQKVTNSMTLRKILYGNDVKIGDKVKVKYYRDGKEKS-----TDIKLEAAKTTT |
| 3PV3 Chain:D ((77-354)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SIGSGVIIDPNNG--VIITNDHVIRNASLITVTLQDGRRLKARLIGGDSETDLAVLKIDAKNLKSL-VIGDSDKLEVGDFVVAIGNPFGLN---SQSATFGIVSALK-------------NF----IQTDAAINPGNAGGALVNAKGELIGINTAILS-YGGNV-GIGFAIPINMVKDVAQQIIKFGSIHRGLMGIFVQHLT--PELAQA--MGYPEDFQ-GALVSQVNPNSPAELAGLKAGDIITQINDTKITQATQVKTTI--SLLRVGSTVKIIVERDNKPLTLSAVVTDIK-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PV3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93326 for 1980 contacts (-47.1/contact) +
2D Compatibility (PS) -27651 + (NN) -5184 + (LL) 9764
1D Compatibility (HY) -22800 + (ID) 5650
Total energy: -144847.0 ( -73.16 by residue)
QMean score : 0.525
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