Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQHQEQEKNQAFFNEQKEKVTLYLKHNIPDFKTVTFTNEEFNPIGISIDGYINNDKNLSFTAGKDVKIFSCSDELDKMFKEPRKGYDEIIEKEETSLEMPKEKTKTINEILSDLKSYEDQIITQNKI
1XXR Chain:D ((71-137))
--------------------------NEPSFKTVKITLDFPNEFLVSVSGYTGVLARLA--TGKDV-IRSLT------FKTNKKTYGPYGKEEGTPFSLPIE-------------------------
General information:
TITO was launched using:
RESULT:
Template:
1XXR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9354 for 370 contacts (25.3/contact) +
2D Compatibility (PS) -6996 + (NN) -2261 + (LL) 5108
1D Compatibility (HY) -4400 + (ID) 1300
Total energy: -495.0 ( -1.34 by residue)
QMean score : 0.219
(partial model without unconserved sides chains):
PDB file :
Tito_1XXR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XXR-query.scw
PDB file :
Tito_Scwrl_1XXR.pdb
: