Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEWSEVEVHTTNEAVEPVANVLTEFGAAGVSIEDVADFLREREDKFGEIYALRREDYPEDGVIIKAYFLKTTEFVEQIPEIEQTLKNLSTFDIPLGKFQFVVNDVDDEEWATAWKKYYHPVQITDRITIVPSWESYTPSANEIIIELDPGMAFGTGTHPTTQLCIRALSNYLQPGDEVIDVGTGSGVLSIASAKLGAKSILATDLDEIATRAAEENITLNKTEHIITVKQNNLLQDINKTNVDIVVANILAEVILLFPEDVYKALKPGGVFIASGIIEDKAKVVEEALKNAGLIIEKMEQQGDWVAIISKRGVE |
| 3CJQ Chain:G ((41-254)) | ----------------------------------------------------------------------------------------APVDLP---YEGVWEEVG--DWLEAWRRDLKPALAPPFVVLAP-WHTW--EGAEIPLVIEPGMAFGTGHHETTRLALKALARHLRPGDKVLDLGTGSGVLAIAAEKLGGKA-LGVDIDPMVLPQAEANAKRNGVRPRFL--EGSLEAALPFGPFDLLVANLYAELHAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAGFRPLEEAAEGEWVLLAYGR--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CJQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98705 for 1764 contacts (-56.0/contact) +
2D Compatibility (PS) -23743 + (NN) -15002 + (LL) 8012
1D Compatibility (HY) -13200 + (ID) 3850
Total energy: -146488.0 ( -83.04 by residue)
QMean score : 0.524
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