Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTLSKGLENVYVAETSISSIIDDM--LTYVGYGIDDLMENNASFEEVIYLLWHLRLPNKDEFKKFKREIQENMAVSETIITSLRMQNHQKLHPMSVLRTTVSMLGVFD-TEAELDDGEAVYRKGLRLQAKMPTIVAAFSRIRRGLDPIPPREDLNMAANFLYMITGEEADELSVEAMNKALVLHADHEFNASTFTARVCVATLSDVYSGVTAAIGALKGPLHGGANERVFDMLEEIDQAGDVRNYIQEKIDTKQKIMGFGHRVYRGGDPRAQHLREMSRKLTAEKGEEKWFDISLQVEE---SVWELKHLKPNVDFYSASVYHALGIDRDLFTLVFSVSRVSGWLAHIFE-QYRDNRLIRPRAIYVGPENRSYLPVEERI |
1IXE Chain:D ((3-376)) | --VARGLEGVLFTESRMCYIDGQQGKLYYYGIPIQELAEKS-SFEETTFLLLHGRLPRRQELEEFSAALARRRALPAHLLESFK-RYPVSAHPMSFLRTAVSEFGMLDPTEGDISR-EALYEKGLDLIAKFATIVAANKRLKEGKEPIPPREDLSHAANFLYMANGVEPSPEQARLMDAALILHAEHGFNASTFTAIAAFSTETDLYSAITAAVASLKGPRHGGANEAVMRMIQEIGTPERAREWVREKLAKKERIMGMGHRVYKAFDPRAGVLEKLARL--------KEYQILKIVEEEAGKVLNPRGIYPNVDFYSGVVYSDLGFSLEFFTPIFAVARISGWVGHILEYQELDNRLLRPGAKYVGELDVPYVPLEAR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IXE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192555 for 3080 contacts (-62.5/contact) +
2D Compatibility (PS) -38273 + (NN) -14063 + (LL) 1220
1D Compatibility (HY) -31600 + (ID) 8450
Total energy: -283721.0 ( -92.12 by residue)
QMean score : 0.523
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