Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGNYVALLRAVNVAGKNKVNMKNLKGALEEEGFQNVVT-------YIQSGNLVLSSILQTETEVAAKITKVIKAICELTIDVFVFSEQNYKQIIANNPFPPETIGEEERWMAAFYNENIDIPRQKNDQAEVIAIGRVLYVHVFSNQIHTLKLPVFLGQYKMALTTTRNWRTTLQLKTLLDSQE
2LLZ Chain:A ((26-96))
--------------------FLRLRSLMYDMNFSSIVADEYGIPRQLNENSFAITTSL-AASEIEDLIRLKCLDLPDIDFDLNIMTVDDYFR-------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2LLZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22304 for 348 contacts (-64.1/contact) +
2D Compatibility (PS) -6962 + (NN) -1191 + (LL) 8756
1D Compatibility (HY) -5600 + (ID) 400
Total energy: -27701.0 ( -79.60 by residue)
QMean score : 0.469
(partial model without unconserved sides chains):
PDB file :
Tito_2LLZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LLZ-query.scw
PDB file :
Tito_Scwrl_2LLZ.pdb
: