Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNPEQFQMALAEKGIELSDD---QMKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISAAFYVDFTKFDTICDVGAGAGFPSLPIKICFPHLKVSIVDSLKKRMTFLDALAEKLGLTDVHFYHDRAETFGQNKAHREKYDLVTARAVARMSVLSELCMPLVKKGGSFLVMKAAQAEQELQTAEKAIKLFGGKVEEHFSFSLPVEESERNIYVITKTKETPNKYPRKPGTPNKLPIE |
3G89 Chain:B ((14-248)) | ---ERGRALLLEGGKALGLDLKPHLEAFSRLYALLQEA-----------EEEVVVKHFLDSLTLLRLPLWQGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVARAVAPLCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGGRLGEVLALQLPLSGEARHLVVLEKTAPTPPAYPRRPGVPERHPL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G89.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 32690 for 1867 contacts (17.5/contact) +
2D Compatibility (PS) -23239 + (NN) -7117 + (LL) 616
1D Compatibility (HY) 9200 + (ID) 1100
Total energy: 11050.0 ( 5.92 by residue)
QMean score : 0.096
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