Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------MLIKGLLSPNSKVSPKDYKVYMRVLSFVFSVCSLIMIVSSFLHTFESNFTKGFSFGSGIALFAGSFYFLVITFSEKRFQHYYTKVFDERNQFIANMSCRLLFLLSVLVLVVLCLINVWFGITFSYAKFLLLILSFVLY-------GYLLIYFILQKLL-----
1T6S Chain:A ((1-162))
MQEQRQQLLRSLEALIFSSEE--PVNLQTLSQITAHKFTPSELQEAVDELNRDYEAT-------GRTFRIHAIAGGYRFLT-EPEFADLVRQLLAPVIQRRLSRSMLEVLAVVAWHQPVTKGEIQQIRGASPDYSIDRLLARGLIEVRGRADSPGRPLQYGTTEVFLDLFHL
General information:
TITO was launched using:
RESULT:
Template:
1T6S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -156898 for 869 contacts (-180.6/contact) +
2D Compatibility (PS) -15159 + (NN) -7965 + (LL) 608
1D Compatibility (HY) 2800 + (ID) 1000
Total energy: -177614.0 ( -204.39 by residue)
QMean score : 0.365
(partial model without unconserved sides chains):
PDB file :
Tito_1T6S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T6S-query.scw
PDB file :
Tito_Scwrl_1T6S.pdb
: