Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLEAKKLGFYHKKDQWLFKEINLEVAPGQVLGIFGQSGCGKTSLSKVLAGFLHPRSGEVLVDGSNLPN-------KAFRPVQLIQQH----PEKTM--NPLWPMK---KSLEEAYYPSRDLLDAFGIQEKWLNRRPSELSGGELQRFSIVRSLHPETKYLIADEMTTMLDSITQASVWKSLLEIVKD--RNLGLIV--ISHDFAMLEKLCNQCYMIEENRIVSFNGD
3TUZ Chain:H ((44-243))
------------------LNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEVKRRVTELLSLVGLGDKH-DSYPSNLSGGQKQRVAIARALASNPKVLLCDQATSALDPAT----TRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTV
General information:
TITO was launched using:
RESULT:
Template:
3TUZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95506 for 1311 contacts (-72.8/contact) +
2D Compatibility (PS) -19132 + (NN) -3044 + (LL) 2192
1D Compatibility (HY) -14400 + (ID) 3200
Total energy: -133090.0 ( -101.52 by residue)
QMean score : 0.460
(partial model without unconserved sides chains):
PDB file :
Tito_3TUZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TUZ-query.scw
PDB file :
Tito_Scwrl_3TUZ.pdb
: