Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNINGIKLLSSRAVSKLGDVLYDYGNSTWIASMGGLGQKILGIYQIVELLVSIVLNPFGGALADRFQRRKILLITDAICAIMCFLLSFIGDDKVMVYGLIVANAILAVSNAFSSPAYKSYIPEIVDKADIITYNANLETIVQIISVSSPVLGFLIFNNFGIRITLIVDAITFLISFL-----FLYAIKVERVQLSKQEKVAIKNILADIADGFTYIKKEKEIMFFLIIAALLNTFLAMFNYLLPFTNSLLKTSGAYATILSISAIGSIIGALIARKIKSSINSMLSMLVFSSLGVIVMGFPSLFELPIWISYSGSFLFNSLLTMFNIHFFSQV |
1SED Chain:A ((4-115)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------DSMDHRIERLEYYIQLLVKTVDMDRYPFYALLIDK-GLSKEEGEAVMRICDELSEELATQKAQGFVTF----DKLLALFAGQLNEKLDVHETIFALYEQGLYQELMEVFIDIMKHFD------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SED.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74670 for 681 contacts (-109.6/contact) +
2D Compatibility (PS) -10742 + (NN) -738 + (LL) 18216
1D Compatibility (HY) -6400 + (ID) 1000
Total energy: -75334.0 ( -110.62 by residue)
QMean score : 0.326
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