Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYKDDSLTLHTDLYQINMMQVYFNKGIHNKRAVFEAYFRKVPFENGYAVF-AGLERIVRYLENLSFSDSDLSYLEEL-GYPEEFLDYLKNLKMEL-TV-KSAKEGDLVFANEPLVQIEGPLAQCQLVETAILNIINY------QTLVATKAA---------RIRS-VI----EDEPLLEFGTRRAQEMDA--AIWGTRAAIIGGANATSNVRAGKIFNIPVSGTHAHALVQTYG--------DDYQAFKAYAETHKD--CVFLVDTYDTLRVGVPNAIRVAKEMGEKINFLGVRLDSGDLAYLSKKVRQQLDDAGFPNAK--IYASNDLDENTILNLKM--QKAKIDVWGVGTKLITA-YDQPALGAVYKIVSIETDAGSMRDTIKLSNNAEKVST--PGKKQVWRITSRAKGKSEGDYITFADTDVTQLDEIEMFHPTYTYINKTVRDFDAVPLLVDIFDKGKLVYQLPSLQEIQEYGRKEFDQLWDEYKRVLNPQDYPVDLARDVWQNKMDLIDRIRKEALAKGEVR |
| 3OS4 Chain:A ((10-385)) | -----TSLLDTDAYKLHMQQAVFHHYRH-ITVAAEFRCRSDE---LLGVYADEIRHQVTLMGQLALTSDEFIYLSSLPFFQDDYLHWLRDFRFKPEQVSVAVHDGKL------DIRIAGLWCEVIMWEVPLLAVISEIVHRRRSTQVTTDQAVQQLRTKLEQFNALSADIDITHFKLMDFGTRRRFSREIQHTVVSTLKDEFPYLVGTSNYDLARTLALAPVGTQAHEWFQAHQQISPTLANSQRVALQVWLDEYPNQLGIALTDCITMDAF-LRD-FDLA--FA--NRYQGLRHDSGDPIEWGEKAIAHYEKLGIDPMKKVLVFSDNLDLEKALFLYRHFYQRIKLVFGIGTRLTCDIPDVKPLNIVIKLVECND-----KPVAKLSDSPGKTICQDPAFVDQLRKAFALP--------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OS4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140309 for 2687 contacts (-52.2/contact) +
2D Compatibility (PS) -35124 + (NN) -6584 + (LL) 9464
1D Compatibility (HY) -17600 + (ID) 3900
Total energy: -194053.0 ( -72.22 by residue)
QMean score : 0.473
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