Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVNYPHQLIRKTTVTKSKKKKIDFANRGMSFEAAINATNDYYLSHELAVIHKKPTPVQIVKVDYPKRSRAKIVEAYFRQASTTDYSGVYKGYYIDFEAKETRQKTAMPMKNFHAHQIEHMANVLQQKGICFVLLHFSTLKETYLLPANELISFYQIDKGNKSMPIDYIRKNGFFVKESAFPQVPYLDIIEEKLLGGDYN
4Q7O Chain:A ((4-136))
MKN----------------------NIFLNLNKKSINNNHFVISIFFETIYQFET--------------KDTLLECFKNITTTGHFGVIGAQYEKIDA--TRWIGDYE-------EVNGFEYIDKAPSIYFSV-GDDFNPEELIIPINLAYHYFNI------AISDFLIAHPEYQKKCKEIQKTY--------------
General information:
TITO was launched using:
RESULT:
Template:
4Q7O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59447 for 998 contacts (-59.6/contact) +
2D Compatibility (PS) -14540 + (NN) -6102 + (LL) 4036
1D Compatibility (HY) -6400 + (ID) 1300
Total energy: -83753.0 ( -83.92 by residue)
QMean score : 0.307
(partial model without unconserved sides chains):
PDB file :
Tito_4Q7O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4Q7O-query.scw
PDB file :
Tito_Scwrl_4Q7O.pdb
: