Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNEKGIVFNIQHFSIHDGPGIRTTVFLKGCPLRCPWCANPESQKMVPETMRDAITNESVIVGEEKSVDDIIEEVLKDIDFY-------EESGGGITLSG-GEIFAQFEFAKAILKRAKS-LG-----IHTAIETTAY-TRHEQFVDLIQYVDFIYTDLKHYNSLKHQEKTM----VKNASIIKNIHYAFAN----GKTIVLRIPVIPNFNDSLEDAEEFACLFDRLDIRQVQLLPFHQFGQNKYRLLNRQYEMEEIAALHPEDLLDYQAI-FSKYNIHCYF |
| 3RFA Chain:A ((114-341)) | -------------------RATLCVSSQVGCALECKFCSTAQQGF-----------------NRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMI--DVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPC-KINLIPWNPFPGAPYG------------RSSNSRIDRFSKVLMS-YGFTTIV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RFA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87240 for 1553 contacts (-56.2/contact) +
2D Compatibility (PS) -22643 + (NN) -10818 + (LL) 4556
1D Compatibility (HY) -11200 + (ID) 1550
Total energy: -128895.0 ( -83.00 by residue)
QMean score : 0.470
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