Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIRNEFYNQLINSEPIGFIDPFTDLGEFDSIQMKFKQPVRNLVNKYSGKPYNLSWQNKIEQMRVLYIKYQKSLKLEDEEQEVHNRVKNKKSKKYVHEIVTTYLKLGFRFKEIEARVSLFNTRLRRNWKRSDYVTTDNPEFYLKKDLQNGYCSPNSFLPRSMKIN |
1XSV Chain:A ((29-62)) | ------------------------------------------------------------------------------------------------NYLELFYLEDYSLSEIADTFNVSRQAVYDNIRRTGDLVEDYEKKLELYQKFEQRREIYDEMKQHLSNP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XSV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8038 for 207 contacts (-38.8/contact) +
2D Compatibility (PS) -3462 + (NN) 75 + (LL) 6580
1D Compatibility (HY) -3600 + (ID) 200
Total energy: -8645.0 ( -41.76 by residue)
QMean score : 0.541
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