Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------MKYVIF-SFEEGDYLCD---NKDKLLIFESRGLAYQYMQKHYL--KPIPLQKTKRIMYPMSYYQAPFKVQQVC--------------------------------------------
4CRI Chain:A ((27-145))
SFVGLRVVAKWSSNGYFYSGKITRDVGAGKYKLLF--DDGYECDVLGKDILLCDPIPLDTEVTALSEDEY----FSAGVVKGHRKESGELYYSIEKEGQRKWYKRMAVILSLEQGNRLREQYGLG
General information:
TITO was launched using:
RESULT:
Template:
4CRI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5168 for 310 contacts (-16.7/contact) +
2D Compatibility (PS) -5994 + (NN) 5885 + (LL) 452
1D Compatibility (HY) -2800 + (ID) 900
Total energy: -8525.0 ( -27.50 by residue)
QMean score : 0.035
(partial model without unconserved sides chains):
PDB file :
Tito_4CRI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CRI-query.scw
PDB file :
Tito_Scwrl_4CRI.pdb
: