Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFIPFKKSNKCVVTDELFLEVTWEDGKPPEDDSELLGIIEGLEQQYLDSFQHSIEESLPYMTFQQAELLFQSLKDAYGHFQLKKVAICHLEGKQAVSEGEVFASPFIIDSRYQNLLLPLIQSIMIGPDFQSYTYQEKREYFVNQIYPAYKVSLGIQESALPLFPEEGEQIPLDNTFVANRRVASIPTTSSEPRKPNSSFSLKKVYLLMGFLATLAAGAMVSSVSLHAELSKQQEQVNYLYQEWKDIQNLSDKEHQIDVFSRYFLPNYYSGKKENLSDFLSDGDAKYTVPKEGSLQSVILEKVTYDAKTKHYQLTYVLTIKAKEQLTSVRLEFEVKEQPSRKYGYVVTSEPKETPYLMKN |
| 2D16 Chain:A ((25-54)) | --------------------------------------------------------------SIFTVDDLARALLTAVPGIKF-GIAMNEAKPQLTRYTGNDPELEALAAKNAVKIGAGHVFVILMKNAYPINVLNTIKNHPAVAMIYGASENPFQVIVAETELGRAVIGVVDGKAANKIETDEQKKERRELVEKIGYKID--------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D16.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10227 for 124 contacts (-82.5/contact) +
2D Compatibility (PS) -3472 + (NN) -1688 + (LL) 15644
1D Compatibility (HY) -1600 + (ID) 200
Total energy: -1543.0 ( -12.44 by residue)
QMean score : 0.460
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