Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFSWLEALYYTLIQLAKVNRLNALFLVSVVGYLCYQGIKLVRKTIRNFFQLMKGFIGDRENIKKCIKNKKEALVHSWKHRQDIDWKSTGKDKSKQLWNLMKRLATVAPSFLFLLLGNVLFRLIYQLPFVKQDRKRFDKEMKPLLYFKNYRSFVFMGIGFSFIAFILTNYFVTVLRAAIRFLYFSIMTLRDNSQVVSFNVDSLLIQNLFNARVFVIAPILAVPIFLIGLVVAWRSAWVNFEQYRDYNHNEEGDDRFATVKEIHQQYKKVPNKTETYPGEGGVPVLHETRKNLTGLTLKSQMLWQNRTFSRYLTNAERILGLLSTPSGDYYIDDSTTNLITMGITRSGKGEAHIAPIIDINSRAEIQPSLIIADPKGEHYQSSYKTMRRRGYDVNVLSFQNMDWSMSYNPLALAIAAAKKGYYEMTQTRVNAVAEAIYRKTKPGSGNGNAKYWEDTSISLFNAIAMALMDRANETVRNGETDAWDTVTVRNIAKFLTDLGSEEVFVNDFGEIVENPDKNQQVKKKSKITVYFDNLRKINQEQFSKFRDMADLNFRSSDFASEETKGNVFSSMMSGINLFLQDNIAKL--TSKNSIDLESVGFPRRLSIKFRSSSNVAMRNEYTHKTAKVTITSQAVWGKTTKQVIHVDAATALIDGEGYLTYVIEPQLPDQFLVTIDFNHENNGGSAIRHKTFQFSAEKVYKKRGNVITLDDYTKKPVLDHIKVTVLNKQDDNLLQKEDIDLIYSDNPKVIYLVTPPNR-TEYNSIVSLFLDQLFNANYELALSNGRKCVNRILHILDEFTNIPAIPHMDTKISIGLGQNILYYLWIQNLKQLVSEYGENTAETIRENCSLKVYIKST--APATNEYFSKELGTRTITRRRRSSNILDEANPNVSIENPRQELLTPTQLSKLQEGEAVILRGVKGRDNAGRKITTDPIFLHEKTSLPYRYMFLQEEFDQSMALADIPVESGHRDLDLQDIAVGAQSTFNKIIDWRMALTDRMRTNGKIPQLASRKQTIKALSQSQFTSPADLTQAVIAEVFDEEDDDDLFFVDDVM |
| 1E9R Chain:A ((49-412)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RDAEPRHLLVNGATGTGKSVL-LRELAYTGLL--RGDRMVIVDPNGDMLSKFG------RDKDIILNPYDQ-RTKGWSFFNEIRND------YDW----QRYALSVVPRGKT----DEAEEWASYGRLLLRETAKKLALIG-------------TPSMRELFHWTTIATFD------------------------DLRGFLEGTL-------------AESLF-----AGSNEASKALTSARFVL----SDKLPEHVTMPDGDFSIRSWL----------------------------------------------------------------------------------------------------------------------------------------------EDPNGGNLFITWREDMGPALRPLISAWVDVVCTSILSLP----EEPKRRLWLFIDELASLEKLASLADALTKGRKAGLRVVAGLQSTSQLDDVYGVKEAQTLRASFRSLVVLGGSRTDPKTNEDMSLSLGEHEVERD-------------RALERVRERVVMPAEIANLPDLTAYVGFAGNRPIAKVPLEIKQFANRQPAFVEGT------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E9R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159133 for 2830 contacts (-56.2/contact) +
2D Compatibility (PS) -36231 + (NN) -5614 + (LL) 48560
1D Compatibility (HY) -10000 + (ID) 2850
Total energy: -165268.0 ( -58.40 by residue)
QMean score : 0.450
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