Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIANQTIVDIVTQVVTPAIQAPFELVDVEYEKMGGDYVLSILIDKPGGITVEDTAQLTDVVSPLLDTIQPDPFPEQYMLEVSSPGLERPLKTAEALSNAVGSYINVSLYKSIDKVKIFEGDLLSFDGE-TLTIDYMDKTRHKTVDIPYQTVAKARLAVKL
1D3B Chain:A ((8-43))
---------------------------------------------------------------------------------------------KVLHEAEGHIVTCETNT----GEVYRGKLIEAEDNMNCQMSNITVTYRDGRVAQLEQVYIRGCKIRF
General information:
TITO was launched using:
RESULT:
Template:
1D3B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19742 for 163 contacts (-121.1/contact) +
2D Compatibility (PS) -3785 + (NN) -13 + (LL) 6612
1D Compatibility (HY) -2000 + (ID) 250
Total energy: -19178.0 ( -117.66 by residue)
QMean score : 0.535
(partial model without unconserved sides chains):
PDB file :
Tito_1D3B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1D3B-query.scw
PDB file :
Tito_Scwrl_1D3B.pdb
: