Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQETTKSIFPKGEKNPYGEFFIGQSYLAALAKSPDG--NVSVGNVTFEAGCRNNWHVHLDGYQILLVTEGSGWYQEEGKEAVSLKPGDVIVTDKGVRHWHGAKKDSEFAHIAITA----GKSEFYEAVSDEKYSKLG
2F4P Chain:D ((17-142))-------IFERGSKGS-SDFFTGNVWVKMLVTDENGVFNTQVYDVVFEPGARTHWHSHPGG-QILIVTRGKGFYQERGKPARILKKGDVVEIPPNVVHWHGAAPDEELVHIGISTQVHLGPAEWLGSVTEEEYRKAT


General information:
TITO was launched using:
RESULT:

Template: 2F4P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15008 for 851 contacts (-17.6/contact) +
2D Compatibility (PS) -13072 + (NN) -4759 + (LL) 756
1D Compatibility (HY) -8800 + (ID) 2750
Total energy: -43633.0 ( -51.27 by residue)
QMean score : 0.434

(partial model without unconserved sides chains):
PDB file : Tito_2F4P.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2F4P-query.scw
PDB file : Tito_Scwrl_2F4P.pdb: