Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKKNKVFLGVLLVLVVILGGGVLFYQSQFQKTTNQALAIAYKDAKVAKKDVIHQKIDKEFENFRGSYEIEFNTK-SAEYSYHVDAKTGQILERDMDNNGFSKSTSQSSSSSSQKSHKISQEEAKKIAFKDANIEESEVSNLKIKEEIENGKSVYDIDFVDLKNKNEVDYQIDAETGKIIERSRDHMND |
2GU3 Chain:A ((9-133)) | -----------------------------KEEGHEAAAAEAKKETDLA----HVDQVETFVG-KEKYYVVKGTDKKGTALYVWVPADKKAKIL------------------SKEAKEGISEDKAAKIIKDEGL---V-SKQKEVHLAREGNVLLWEVTYLD-KEGQYSLSYVDFTTGKILKNITP---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GU3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 19666 for 920 contacts (21.4/contact) +
2D Compatibility (PS) -13077 + (NN) -849 + (LL) 3708
1D Compatibility (HY) -2400 + (ID) 1150
Total energy: 5898.0 ( 6.41 by residue)
QMean score : 0.308
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