Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSDIKILALDLDGTLFTTDKKVSEENKVALKAAREKGIKVVITTGRPLKAIGNLLEDLELVSDEDYSITFNGGLVQQNT-GKILAKTAMTRQEVEDIHEELYQVGLPTDILSEGTVYS----IANKGHHSQYHLANPLLEFIEVDDLEQVPKDVVYNKIVSVIDATYLDQQIAKLPDRLKVDYEMFKSRDIILELMPKGVHKAVGLELLTKHLGLDSSQVMAMGDEANDLSMLEWAGLGVAMANGIPEAKAIAKATTICNNDESGVAEAIGKYILSEEN
1RKQ Chain:B ((5-272))---IKLIAIDMDGTLLLPDHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLV-FCEA---EKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVT-KSNLEDGVAFAIEKYVLN---


General information:
TITO was launched using:
RESULT:

Template: 1RKQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124370 for 2326 contacts (-53.5/contact) +
2D Compatibility (PS) -28013 + (NN) -8713 + (LL) 564
1D Compatibility (HY) -24800 + (ID) 5000
Total energy: -190332.0 ( -81.83 by residue)
QMean score : 0.582

(partial model without unconserved sides chains):
PDB file : Tito_1RKQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1RKQ-query.scw
PDB file : Tito_Scwrl_1RKQ.pdb: