Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIELGITTFGETTILEETNQSYSHPERIRQLVAEIELADQVGLDVYGIGEHHREDF-AVSAPEIVLAAGAVRTNNIRLSSAVTILSSNDPIRVYQQFSTIDALSNGRAEIMAGRGSFIESFPLFGYDLADYDDLFNEKMDMLLAINSATNLDWKGH-LTQTVNERPIYPRALQ-RQLPIWVATGGNVDSTIRIAEQGLPIVYATIGGNPKAFRQLVHIYKEVGSRNGHKPEQLKVAAHSWGWIEEDNQTAIDRYFFPTKQTVDNIAKGRPHWSEMTKEQYLRSVGPEGAIFVGSPEVVAHKIIGLVEALELDRFMLHLPVGSMPHKDVLNAIKLYGKEVAPIVRKYFEKN |
| 1LUC Chain:B ((1-320)) | -MKFGLFFLNFMNS------KRSSDQVIEEMLDTAHYVDQLKFDTLAVYENHFSNNGVVGAPLTVAGFLLGMTKNAKVASLNHVITTHHPVRVAEEACLLDQMSEGRFAFGFSDCEKSADMRFFNRPTDSQFQLFSECHKIINDAFTTGYCHPNNDFYSF--PKISVNPHAFTEGGPAQFVNAT-SKEVVEWAAKLGLPLVFRWDD-SNAQRKEYAGLYHEVAQAHGVDVSQVRHKLTLLVNQNVDGEAARAEARVYLEEFVRESYSNT-DFE-----QK-MGEL-LSENAIGTYEESTQAARVAIECCGAADLLMSFESM-EDKAQQRAVIDVVNANIV---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LUC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153770 for 2661 contacts (-57.8/contact) +
2D Compatibility (PS) -33446 + (NN) -7659 + (LL) 1716
1D Compatibility (HY) -2800 + (ID) 2350
Total energy: -198309.0 ( -74.52 by residue)
QMean score : 0.503
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