Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNVKKRPEVLSPAGTLEKLKVAIDYGADAVFVGGQAYGLRSRAGNFSMEELQEGINYAHARDAKVYVAANMVTHEGNELGAGPWFRELRDMGLDAVIVSDP---------ALIVICATEAP-GLEIHLSTQASSTNYETFEFWKEMGLTRVVLAREVTMAELAEIRKRTDVEIEAFVHGAMCISYSGRCVLSNHMSHRDANRGGCSQSCRWKYDLYDMPFGQERQSLKGEIPEPFSMSAVDMCMIEHIPDMIENGVDSLKIEGRMKSIHYVSTVTNCYKAAVDAYMESPEAFEAIKEDLIDELWKVAQRELATGFYYHTPTENEQLFGARRKIPQYKFVGEVVSFDNAKMEATIRQRNVIMEGDRVEFYGPGFRHFECFIDGLRDAEGNKIDRAPNPMELLTITLPNPVKKGDMIRACKEGLVNLYQNDGTSKTVRA |
| 3TSM Chain:A ((130-253)) | --------------FDPYQVYEARSWGADCILIIMASVD---------DDLAKELEDTAFALGMDALIEVHD---EAEME-------RALKLSSRLLGVNNRNLRSFEVNLAVSERLAKMAPSDRLLVGESGIF--THEDCLRLEKSGIGTFLIGESLMRQHDVAAATRALLTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TSM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69000 for 827 contacts (-83.4/contact) +
2D Compatibility (PS) -13008 + (NN) -6999 + (LL) 19356
1D Compatibility (HY) 0 + (ID) 750
Total energy: -70401.0 ( -85.13 by residue)
QMean score : 0.540
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