Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNTNDFDFYLPEELIAQTPLEKRDASKLLVIDHKNKTMTDSHFDHILDELKPGDALVMNNTRVLPARLYGEKPDTHGHIELLLLKNTEGDQWEVLAKPAKRLRVGTKVSFGDGRLIATVTKELEHGGRIVEFSYDGIFLEVLESLGEMPLPPYIHEKLEDRDRYQTVYAKENGSAAAPTAGLHFTKELLEKIETKGVKLVYLTLHVGLGTFRPVSVDNLDEHEMHSEFYQLSKEAADTLNAVKESGGRIVAVGTTSIRTLETIGSKFNGELKADSGWTNIFIKPGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYNHAVEERYRFFSFGDAMFVK |
| 1XNE Chain:A ((33-92)) | ---------------------------------------------------------------------------------------------------KDIKRGDKIIFNDL-IPAEVVE-------VKKYE---TFRQVLREEPIDKIFPDKPSFEKALKRFHNMYPKWKEYRYGVLAIKFRVLGRDKE------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1XNE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -10785 for 278 contacts (-38.8/contact) +
2D Compatibility (PS) -6741 + (NN) -4228 + (LL) 16244
1D Compatibility (HY) -1600 + (ID) 700
Total energy: -7810.0 ( -28.09 by residue)
QMean score : 0.074
|
|
|