Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRLWHQDIIELLPRQQLLGQHRECCALRG-------NG----WGRKHETVD-------YVFRYSPYRLFAYHQLVMEEMMERGYRVSKEWLIAEYRGMKCPRYDTLNPVDLETPIYPEHNQDYLQECLWNLKAKGIDLPINKIK
2END Chain:A ((3-92))
-RINLTL-VSELADQHLMAEYRELPRVFGAVRKHVANGKRVRDFKISPTFILGAGHVTF-FYDKLEFLRKRQIELIAECLKRGFNIKDTTVQDISDIPQEFRGDYIPHEASIAISQARLDEKIAQRPTWYKYYGKAIYA-----
General information:
TITO was launched using:
RESULT:
Template:
2END.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35545 for 399 contacts (-89.1/contact) +
2D Compatibility (PS) -7640 + (NN) -467 + (LL) 936
1D Compatibility (HY) -2800 + (ID) 750
Total energy: -46266.0 ( -115.95 by residue)
QMean score : 0.391
(partial model without unconserved sides chains):
PDB file :
Tito_2END.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2END-query.scw
PDB file :
Tito_Scwrl_2END.pdb
: