Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSFNRKKLKFLGISLATLTATTVTLVACGNESKNSGDNKVINWYIPTEISTLDISKNTDAYSNLAIGNSGSNLLRIDKEGKPKPDLAKKVSVSSDGLTYTATLRDNLKWSDGSKLSAEDFVYTWRRIVDPKTASEYAYLATESHLLNADKINSGDIKDLNKLGVTAKGN-QVTFKLTSPCPQFKYYLAFSNFMPQKQSYVEKVGKDYGTTSKNQIYSGPYLVKDWNGSNGKFKLVKNKYYWDSKHVKTNSVIVQTIKKPDTAVQMYKQGQIDFAE--ISGT-----------SA-----------IYNQTGSVKALTNQKIRQALNLATDRKGVVKAAVDTGSTPAESLVPKKLAKLPNGEDLSKYT-APGYTYNTSKAQKLFKEGLAEVGQSSLKLTITADSDSPAAKNAVDYVKSTWESALPGLTVEEKFVTFKQRLEDAKNENFDVVLFSWGGDYPEGSTFYGLFTTNSAYNYGKFSSKEYDNAYQKAITTDALKPGDAANDYKTAEKALFDQSYYNPVYYLGKKGLQNSKLKGLV--RNSTGLNVDFTYAYKTE |
| 1JET Chain:A ((10-515)) | ------------------------------------ADKQTLVRNNGSEVQSLDPHKIEGVPESNVSRDLFEGLLISDVEGHPSPGVAEKWEN-KDFKVWTFHLRENAKWSDGTPVTAHDFVYSWQRLADPNTASPYASYLQYGHIANIDDIIAGKK-PATDLGVKALDDHTFEVTLSEPVPYFYKLLVHPSVSPVPKSAVEKFGDKWT-QPANIVTNGAYKLKNWVVN-ERIVLERNPQYWDNAKTVINQVTYLPISSEVTDVNRYRSGEIDMTYNNMPIELFQKLKKEIPNEVRVDPYLCTYYYEINNQK--APFNDVRVRTALKLALDRDIIVNKVKNQGDLPAYSYTPPYT-DG-AKL-VEPEWFKWSQQKRNEEAKKLLAEAGFTAD-KPLTFDLLY-NTSDLHKKLAIAVASIWKKNL-GVNVNLENQEWKTFLDTRHQGTFDVARAGWCADYNEPTSFLNTMLSDSSNNTAHYKSPAFDKLIADTLKV-A-DDTQRSELYAKAEQQLDKDSAIVPVYYYVNARLVKPWVGGYTGKDPL-DN-IYVKNLYIIK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JET.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39052 for 4165 contacts (-9.4/contact) +
2D Compatibility (PS) -51404 + (NN) -19805 + (LL) 2500
1D Compatibility (HY) -16400 + (ID) 6550
Total energy: -130711.0 ( -31.38 by residue)
QMean score : 0.426
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