Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLSVLDYGLIDYGKTASDAIQETILLSQEAERLGYHQFWVAEHHGVKAFSISNPELMIMHLANQTKSIKIGSGGIMPLHYSSFKLAETLKTLETCHPNRVSIGLGNSLGTVKVSNALRSLH-K-AHDYEEVLEELKSWLIDK-SSSKE------PL-VQPTLS--SFPDLYVLGSGQKSAYLAAKLGLGFTFGVFPFMDKDPLTEAKKLSSLYYHQFEEYYPNKS-PNLMVAAFVVIADTSEEAENIAKTLDIWMLGNKDFNEFATFPTIEEANHYQLTPEQKAKIKSNRHRMIVGDPKQVKDSLDALVNASQAEELLLIPLVPG-LDQRIKSLKLLSQLY |
| 1LUC Chain:B ((1-319)) | MKFGLFFLNFMNSKRSSDQVIEEMLDTAHYVDQLKFDTLAVYENHFSNNGVVGAPLTVAGFLLGMTKNAKVASLNHVITTHHPVRVAEEACLLDQMSEGRFAFGFSDCEKSA-DMRFFNRPTDSQFQLFSECHKIINDAFTTGYCHPNNDFYSFPKISVNPHAFTEGGPAQFVNATSKEVVEWAAKLGLPLVFRWDD--SNA---QRKEYAGLYHEVAQAHGVDVSQVRHKLTLLVNQNVDGEAARAEARVYLEEFVRESYS--N------T-----DFE--Q--KMGELLSENAIGTYEESTQAARVAIECCGAADLLMSFESMEDKAQQRAVIDVVNANI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LUC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131365 for 2562 contacts (-51.3/contact) +
2D Compatibility (PS) -33313 + (NN) -15769 + (LL) 1436
1D Compatibility (HY) -3600 + (ID) 2300
Total energy: -184911.0 ( -72.17 by residue)
QMean score : 0.542
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