Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------MMDFYIKQIIIHQFSPNDTELVLSDTPLTLTPRIDDYFRKKLSKVFSDEAKRGYFGEDNVFMSHLQDDLYVSSCQIAQLWKEEFVIS-EDQKTNDLVFIQFDKDGMEHFAFLRISLK-EQFAHVSENQEQ-PITITQNNLPSAAQTP-DE-ALVVNKSSKQYYLIEK---RIKHNG------------------SFANYFSENLLQVQPE----------------QSVKKSIKMVEQTAQKIAENFNKDDFSFQSKM-K------------------SAIYKNLEEEQELSPEK--LADQLFDDNLTARLTFVDELKDAIPGPVQVSDIDHSRQIKKLENQKLSLSNGIELI-VP---NNVYQDAESVEFIQNPDGTY-SILIKNI-QDIQNK---------------------------- |
| 2HVG Chain:A ((21-478)) | HLKNISPIDGRYKKACGELSAFFSEHALIKHRIIVEVRWLLFLNEEELFFEKVTDHSVEVLNQIATNITDSDIARVKAIEH------DVKAVEYFVKEKLKNSKREDLLKIKEYVHYLCTSEDINNVAYATCLKACLNDVVIPCLEKIMLKLKDLAVEYSHVPLLSRTHGQPASSTTFGKEMANFYARIHHHVGVIRRVKVCAKFNGAVGNFNAHKVASKDTDWVNTIGLFLKKHFNLTYSIYCTQIQDHDYICELCDGLARANGTLIDLCVDIWLYISNNLLKLKSSTMPHKVNPIDFENAEGNLHIANAFFKLFSSKLPTSRLQRDLSDSTVLRNIGSSLAYCLIAYKSVLKGLNKIDIDRRNLEEELNQNWSTLAEPIQIVMKRHNYVDAYEELKQFTRGKVIDQKIMQEFIKTKCAFLPQDVVDQLLELTPATYTGYADYLAKNVERLS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HVG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11739 for 2087 contacts (-5.6/contact) +
2D Compatibility (PS) -33105 + (NN) -11170 + (LL) 44
1D Compatibility (HY) -8800 + (ID) 2000
Total energy: -66770.0 ( -31.99 by residue)
QMean score : 0.276
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