Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIDTFKVKWFKRGMSLLVLILVFFLGLGFGQMGNSSQSKDRPKQTATKKTRTN-TITQTQVKEFLVAYYTKKDLEENRNRYKDYMTEGLYNATISEENKAQNQAYRGFVVNFEFQDANIYIDQVHKQVICEVTYTNDLLQKKNNKDGAQIGVVNHTTIQLAYTKLNGKYLINQMSTILLTDSANPSEETESYGAIAPSNTKD |
1QQR Chain:A ((151-288)) | --------IQNQAKSVDVEYTVQFTPLN----PDDDFRPGLKLTKLLKTLAIGDTITSQELLAQAQSILNKN--------HPGYTIYERDSSIVTHDNDIFRTIL-------PMDQEFTYRVKNREQA-----------YRINKKSGLNEEINNTDLISEKYYVLKKGE--------------------------KPYDPFD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QQR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18768 for 869 contacts (-21.6/contact) +
2D Compatibility (PS) -14745 + (NN) -2908 + (LL) 4576
1D Compatibility (HY) 800 + (ID) 1150
Total energy: -32195.0 ( -37.05 by residue)
QMean score : 0.183
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