Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTFLGNSVTFTGKQLQVGDIAKDFLLIATDLSQKSLKDFEGKKKVISVVPSIDTGICSKQTRTFNEELSELDNTVVITVSMDLPFAQKRWCSAEGLDNVILLSDFYDHSFGQDYALLMNEWHLLTRAVLILDEHNKVTYTEYVDNVNSDVDYEAAINAAKILP
3P7X Chain:D ((7-164))
--TFKGGPIHLKGQQINEGDFAPDFTVLDNDLNQVTLADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASK-EEGIVLTISADLPFAQKRWCASAGLDNVITLSDHRDLSFGENYGVVMEELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKNI-
General information:
TITO was launched using:
RESULT:
Template:
3P7X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83443 for 1262 contacts (-66.1/contact) +
2D Compatibility (PS) -16802 + (NN) -854 + (LL) 640
1D Compatibility (HY) -15600 + (ID) 4150
Total energy: -120209.0 ( -95.25 by residue)
QMean score : 0.536
(partial model without unconserved sides chains):
PDB file :
Tito_3P7X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P7X-query.scw
PDB file :
Tito_Scwrl_3P7X.pdb
: