Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDLFLSLERKFKAASDKEVSKQQEAYLRHHFKCYGIKSPERRMLYKELIKAAK-RQAKIDW-QLLDKCWQSDYREYHHFVLDYLLAMSQFLTYNDCSRLEFYARHQQWWDSIDVLTKIFGNLSLKDDKVMNL-LSEWSLDQDFWMRRLAIEHQLGFKEKTNTDILSLFILRNT-GSQEFFINKAIGWALRDYSKYNKVWVKDFISNHYDELSTLSIREGSKYL
2B6C Chain:A ((6-215))
---------TLQFQKNPETAAKMSAYMKHQFVFAGIPAPERQALSKQLLKESHTWPK-EKLCQEIEAYYQKTEREYQYVAIDLALQNVQRFSLEEVVAFKAYVPQKAWWDSVDAWRKFFGSWVALHLTELPTIFALFYGAENFWNRRVALNLQLML-KEKTNQDLLKKAIIYDRTTEEFFIQKAIGWSLRQYSKTNPQWVEELMKEL-V-LSPLAQREGSKYL
General information:
TITO was launched using:
RESULT:
Template:
2B6C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93590 for 1598 contacts (-58.6/contact) +
2D Compatibility (PS) -21580 + (NN) -6871 + (LL) 1292
1D Compatibility (HY) -12400 + (ID) 3300
Total energy: -136449.0 ( -85.39 by residue)
QMean score : 0.443
(partial model without unconserved sides chains):
PDB file :
Tito_2B6C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B6C-query.scw
PDB file :
Tito_Scwrl_2B6C.pdb
: