Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRALKEDFFLTLTSLKNQFWVYIGTGILIQTLVAYLVKGILSFIFRRILILSNTPAVTKDNWTLLFNHPLALLLFILYIVILIGFIYTEFAIYTIAILKTEFSLSIKKWLTIFPKKIKSLLGPQLIWVSIYLLLTIPLANLGLRSSILEHLKIPDFISGELTKTVFGKIGYSTLLLLICYLNLRLIYFLPLTILTDYNAKEALLESWKLSRGKHQWRLLSKIILTSLFISVIGTVALAVVAGTSSFIDHSGNNFPLQATFYNLLKSILFAVTLLIKCLIISHLLADIKQNKSIVQQWRAWKGVQHKQKFKHIACVILALAIGTTALKNAIALALLQDNISIKKELIAHRGDTSHGVENSIEALKAAHKAKADYSEMDVIMTKDHKLVVIHDDNLKRLSGMNKDVSKLTLDQVTKIP--IHQG-RFASH-IPSFAEFMKTAQSLDQKIMIELKPYNQNLDIYA---DEFIKEFKELRLSTKHKVMSLNLTLIEKVEKKLPQLDTGYLI------PLHWGTLQNHNVDFYGIEEFSYNDWIAYLAQEYNK---QLYVWTINRDNLMIRYLQSPVNGIITDELNLFKVINKDIKNSPNYYQRALQLIDSEG |
| 2PZ0 Chain:B ((10-240)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKTLVIAHRGDSKNVPENTIAAFKRAMELGADGIELDVQLTKDGHLVVIHDETVDRTTNGEGFVKDFTLEEIKKLDAGIKFGEKFAGERIPTLYEVFELIGDKDFLVNIEIK---SGIVLYPGIEEKLIKAIKEYNFEERVIISSFNHYSLRDVKKMAPHLKIGLLYQCGLVEPWHMAL----RMEAYSLHPFYFN-IIPELVEGCKKNGVKLFPWTVDRKEDMERMIKAGVDGIITDDPETLINLVRKGG----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PZ0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66055 for 1740 contacts (-38.0/contact) +
2D Compatibility (PS) -23161 + (NN) -8093 + (LL) 33248
1D Compatibility (HY) -19200 + (ID) 3800
Total energy: -87061.0 ( -50.04 by residue)
QMean score : 0.357
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