Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTLAEYSEAEFQKALRRNIRALTRGKTISSTPKAVLLGGQSGAGKTTIHRIKQKEFQGNIIIIDGDSFRSQHPNYLALQEEYGKYSVDYTKDFAGKMVEHLIGGLSKQSYHLLIEGTLRTTEVPRKTAQLLKSRGYQVSLALIATKPELSYLSTLIRYEELYAIDPNQARATPKEYHDGIVEHLVDNLRELENDKLFNRIQIYQRDRHCVYDS-ETDKGIAAEVLQECLFGKWS--KVEEEMLRVGQERLRELSMRTPK |
3Q8X Chain:D ((4-260)) | --IVNFTDKQFENRLNDNLEELIQGKKAVESPTAFLLGGQPGSGKTSLRSAIFEETQGNVIVIDNDTFKQQHPNFDELVKLYEKDVVKHVTPYSNRMTEAIISRLSDQGYNLVIEGTGRTTDVPIQTATMLQAKGYETKMYVMAVPKINSYLGTIERYETMYADDPMTARATPKQAHDIVVKNLPTNLETLHKTGLFSDIRLYNREGVKLYSSLETPSISPKETLEKELNRKVSGKEIQPTLERIEQKMVLNKHQETPE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3Q8X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79620 for 1929 contacts (-41.3/contact) +
2D Compatibility (PS) -28105 + (NN) -16155 + (LL) 260
1D Compatibility (HY) -15200 + (ID) 4950
Total energy: -143770.0 ( -74.53 by residue)
QMean score : 0.625
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