Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKVQTGGKLYIAGEYAILYPGQVAILKNIPIYMTALATFADNYSLY--SDMFNYT----A-S---L-QP-DKQYSLIQETILLMEEWLINFGKNIKPIHLEITGKLERYGLKFGIGSSGSVVVLTIKAMAALYEIEMPSDLLFKLSAYVLLKRGDNGSMGDIACIAYEHLISYSAFDRRAVSKMIETKPLEQVLEAEWGYRITKIQASLEMDFLVGWTMQP-SISKEMINIVKSTITQRFLDDTNYQVVQLLSAFKEGDKEAIKRCLEEISLLLFNLHPSIYTDKLQKLKEASKGLDIVTKSSGSGGGDCGIAISFNKNDNQTLIKRWESAGIELLSKETLS |
| 1KKH Chain:A ((6-314)) | -MIIETPSKVILFGEHA-VVYGYRAISMAIDLTSTIEIKETQEDEIILNLNDLNKSLGLNLNEIKNINPNNFGDFKYCLCAIKNTLDYLNI--EPKTGFKINISSKIPIS---CGLGSSASITIGTIKAVSGFYNKELKDDEIAKLGYMVEKEIQGKASITDTSTITYKGILEIKNNKFRK----IKG---------EFE------EFLKNCKFLIVYAEKRKKKTAELVNEVAKIE--NKDEIFKEIDKVIDEALKIKNKEDFGKLMTKNHELLKKLN--ISTPKLDRIVDIGNRFGFGAKLTGAGGGGCVIILVNEEK-EKELLKELNKEDVRIFNCRMMN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KKH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163534 for 2581 contacts (-63.4/contact) +
2D Compatibility (PS) -31883 + (NN) -14475 + (LL) 2460
1D Compatibility (HY) -12800 + (ID) 3100
Total energy: -223332.0 ( -86.53 by residue)
QMean score : 0.375
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