Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKRASGVLMHITSLPGDLGIGTFGREAYAFVDFLVETDQKFWQILPLTTTS----FGDSPYQSFSAVAGNTHLIDFDLLTLEGFISKDDYQNISFGQDPEVVDYAGLFEKRRPVLEKAVKNFLQEER-ATRMLSDFLQ--E-EKWVTDFAEFMAIKEHFGNKALQEWDDKAIIRREEEALAGYRQKLSEVIKYHEVTQYFFYKQWFELKEYANDKGIQIIGDMPIYVSADSVEVWTMPELFKLDRDKQPLAIAGVPADDFSDDGQLWGNPIYNWDYHKESDFDWWIYRIQSGVKMYDYLRIDHFKGFSDYWEIRGDYQTANDGSWQPAPGPELFATIKEKLGDLPIIAENLGYIDERAERLLAGTGFPGMKIMEFGFYDTTGNSIDIPHNYTENTIAYAGTHDNEVINGWFENLTVEQKAYAENYMRRLPNEPITETVLRTLYATVSQTTITCMQDLLDKPADSRMNMPNTVGGNWQWRMRKEDL-TEN--RKAFLKEITTIYNRGNK |
| 1X1N Chain:A ((24-524)) | -DRRRAGILLHPTSFPGPYGIGDLGPQAFKFLDWLHLAGCSLWQVLPLVPPGKRGNEDGSPYSGQDANCGNTLLISLEELVDDGLLKMEEL---PEPLPTDRVNYSTISEIKDPLITKAAKRLLSSEGELKDQLENFRRDPNISSWLEDAAYFAAIDNSVNTISWYDWPE-PLKNRHLAALEEVYQSEKDFIDIFIAQQFLFQRQWKKVRDYARSKGISIMGDMPIYVGYHSADVWANKKQFLLNRKGFPLIVSGVPPDAFSETGQLWGSPLYDWKAMEKDGFSWWVRRIQRATDLFDEFRIDHFRGFAGFWAVPSEEKIAILGRWKVGPGKPLFDAILQAVGKINIIAEDLGVITEDVVQLRKSIEAPGMAVLQFAFGSD-AENPHLPHNHEQNQVVYTGTHDNDTIRGWWDTLPQEEKSNVLKYLSNIEEEEISRGLIEGAVSSVARIAIIPMQDVLGLGSDSRMNIPATQFGNWSWRIPSSTSFDNLDAEAKKLRDILATYGRL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1X1N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -185398 for 4133 contacts (-44.9/contact) +
2D Compatibility (PS) -52330 + (NN) -27903 + (LL) 552
1D Compatibility (HY) -35600 + (ID) 8650
Total energy: -309329.0 ( -74.84 by residue)
QMean score : 0.533
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