Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLLYIFEKNIILRKILITFSLIIIFLLGRYVPIPGVLISAYKGQDNNFATLYSTVTGGNLSQVGVFSLGIGPMMTTMILLRLFTIGKYSS-----GVSQKVQQFRQNVVMLVIAIIQGLAIAISFQYHNGFSLTKLLLATMILVTGAYIISWIGNLNAE-YGFG-GMTILVVVGMLVGQFNNIPLI--------------------FELFQDGYQ-----L-------A-IILFLLWTLVAMY-LMITFERSEYRIPVMRTSIHNRLVDDAYMPIKVNASGGMAFMYVYTLLMFPQYIIILLRSIF---PT-------NPD----------ITSYNDYF---------SLSSIQGVVIYMILMLVLSVAFT----FVN-IDPTKISEAMRESGDFIPNYRPGKETQSYLSKICYLFGTFSGFFMAFLGGVPLLFALGNDDLRTVSSMTGIFMMITGMSFMILDEFQVIRIRKQYTSVFENEEN |
| 2WW9 Chain:A ((20-477)) | --VELPFEKLPFDDKIVYTIFAGLIYLFAQ-FPLVGLPKATTP-NVNDPIYFLRGVFG--CEPRTLLEFGLFPNISSGLILQLLAGLKVIKVNFKIQSDRELFQSLTKVFAIVQYVILTNIFIFAGYFGDDLSVVQIGLINFQLVGAGIFTTLLAEVIDKGFGFSSGAMIINTVVIATNLVADTFGVSQIKVGEDDQTEAQGALINLIQGLRSKHKTFIGGIISAFNRDYLPNLTTTIIVLAIAIIVCYLQSVRVELPIRSTRA---RGTNNVYPIKLLYTGCLSVLFSYTILFYIHIFAFVLIQLVAKNEPTHIICKIMGHYENANNLLAVPTFPLSLLAPPTSFFKGVTQQPLTFITYSAFILVTGIWFADKWQAISGSSARDVALEFKDQGITLMGRRE-QNVAKELNKVIPIAAVTGASVLSLITVIGESLGLKG--------KAAGIVVGIAGGFSLLEVITIEYQQSGGQSALNQVLG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WW9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -311907 for 2811 contacts (-111.0/contact) +
2D Compatibility (PS) -39734 + (NN) -9318 + (LL) 144
1D Compatibility (HY) -23600 + (ID) 2750
Total energy: -387165.0 ( -137.73 by residue)
QMean score : 0.304
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