Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRVHITS-IYGQSP--RSIAL--ISQKLVKDVGRQLGYDEMGIYFYNDHA-E-------T--HGER-------------STRM-------DGII-AGLGRGDIVVFQVPTWNSTEFDELFLDKLQAY-GARIITFVHDIVPLMFES----NFYLLDRVIDMYNRSDVVILPTKAMHDYLIEK-GMTTSKVLYQEVWDHPVNIDL---------PRPECQKVLSFAGDIQRFPF----VNDWK--------ENIPLIYYGDGSRL----------NSEANVHAQGWKDDVELMLSLSKRGGFGLCWSEDREELVERRYSRMNASYKLSTFLAAGLPIIANHDISSRDFIKQHGLGFTVET--LEEAVEKINNME--KETYDSYVENVEKIATLLRNGYITKKLLIDAVHMLYR |
| 3C48 Chain:A ((21-423)) | MRVAMISMHTS-PLQQ----GMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEGLSKEELPTQLAAFTGGMLSFTRREKVTYDLIHSHYWLSG---QVGWL---LRDLWRIPLIHTAHTLAAVKNSYDTPESEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVELYSPGTERSRRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPS--DTYRHMAEELGVEKRIRFLDPRPPSELVAVYR-AADIVAVP-----------SFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLLDDDETRIRMGEDAVEHA-----RTFSWAATAAQLSSLYN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C48.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -196246 for 2445 contacts (-80.3/contact) +
2D Compatibility (PS) -33441 + (NN) -21776 + (LL) 2576
1D Compatibility (HY) 1600 + (ID) 2050
Total energy: -249337.0 ( -101.98 by residue)
QMean score : 0.399
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