Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVNTKTLLPYKTMPVWTAQSIPKAFLEKHNTKEGTWAKLTILSGSLVFYQLSPDGEEISRHIFDASSDIPFVDPQVWHKVSPNSPDLSCYLTFYCQKEDYFHKKYGLTRTHSEVIASAPLLSEKSNILDLGCGQGRNSLYLSLLGHQVTSVDSNGQSLVALENMALEEELP-YNIKRYDINTAAIEGHYDFILSTVVFIFLNPDCISDIILQMQSHTQIGGYNLIVSAMDTAENPCPLPFPFTFKEGQLKSYYNDWEIIKYNENLGELHRVDENGNRLKLQFATLLARKLRS |
| 4DQ0 Chain:D ((7-199)) | -----------------------------------------------------------------------------------------------RDENYFTDKYELTRTHSEVLEAVKVV-KPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDGEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEGWEMVKYNEDVGELHRT---GNRIKLRFATMLARKK-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DQ0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107403 for 1526 contacts (-70.4/contact) +
2D Compatibility (PS) -20223 + (NN) -5479 + (LL) 5888
1D Compatibility (HY) -20800 + (ID) 5000
Total energy: -153017.0 ( -100.27 by residue)
QMean score : 0.566
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