Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLKHIVLGLALTTLLGVTFSNQEVSASSTSSKVVKVGVMTFSDTEKARWDKIEKLVGDKAKIKFTEFTDYTQPNQATANKDVDINAFQHYNFLENWNKENKKNLIPLEKTYLAPIRIYSEKVKSLKKLKKGATIAIPNDATNGSRALYVLQSAGLIKLNVSGKKVATVANITSNKKDINIQELDASQTPRALKDVDAAIINNTYIEQANLKPS-DAIFVEKSDKNSKQWINIIAGRKNWKKQKNAKAIQAILDAYHTDEVKKVIKDTSADIPQW
3K2D Chain:B ((36-228))--------------------------------------------------------------VELVTFTDYVTPNAALDDGSIDMNAFQHKPYLDRQVEDRDYKLTIAGNTFVYPIAGYSKQVKSVAALADGVRIAVPNDPTNLGRSLLLLEQQGLIKLRPEVGLLATVRDIVENPKNITIMELDAAQLPRSLDDVALSIINTTYASSINLTPEKDGVFVE--DKESP-YVNLIVARQDNVQNEN---VQNFVKAYQTEEVYTAAKEIFK-----


General information:
TITO was launched using:
RESULT:

Template: 3K2D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43775 for 1503 contacts (-29.1/contact) +
2D Compatibility (PS) -19879 + (NN) -2988 + (LL) 5956
1D Compatibility (HY) -16800 + (ID) 4150
Total energy: -81636.0 ( -54.32 by residue)
QMean score : 0.365

(partial model without unconserved sides chains):
PDB file : Tito_3K2D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3K2D-query.scw
PDB file : Tito_Scwrl_3K2D.pdb: