Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLQNIGQTGIQATRIALGCMRMSD--LEGKQAEEVVGTALDLGINFFDHADIYGGGLSELRFRDAIKHLNVNRDKMIIQSKCGI----RE----GYFDFSKEYILSSVDGILERLGTEYLDFLILHRPDVLVEPEEVAEAFTKLRAEGKVKHFGVSNQNRFQMELLQSYLDEPLAVNQLQLSPAHTPMFDAGLNVNMLNKASIEHDDGIVDYCRLKRVTIQAWSPFQIDLSRGLFVNHPDYKELNETIAKLAKNYNVSS-EAIVIAWILRHPAQIQAIVGSMNPSRLKAIDKANDIALTREEWYDIYRSAGNILP |
1OG6 Chain:C ((6-292)) | ---TIAPQGPEFSRFVMGYWRLMDWNMSARQLVSFIEEHLDLGVTTVDHADIYGGYQCEAAFGEALKLAPHLRERMEIVSKCGIATTAREENVIGHYITDRDHIIKSAEQSLINLATDHLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGVSNFTPAQFALLQSRLPFTLATNQVEISPVHQPLL----------------LDGTLDQLQQLRVRPMAWSC----LGGGRLFNDDYFQPLRDELAVVAEELNAGSIEQVVNAWVLRLPSQPLPIIGSGKIERVRAAVEAETLKMTRQQWFRIRKAALGYDV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OG6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173896 for 2315 contacts (-75.1/contact) +
2D Compatibility (PS) -29770 + (NN) -14400 + (LL) 1824
1D Compatibility (HY) -18000 + (ID) 5550
Total energy: -239792.0 ( -103.58 by residue)
QMean score : 0.503
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