Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKKSKIAKFQKQQKLVEQYAELRRELKEKGDYEALRKLPKDSNPNRLKNRDLIDGRPHAYMRKFGMSRINFRNLAYKGQIPGIKKASW
4YHH Chain:N ((18-60))
----------------------------------------------RAYTRCVRCGRARSVYRFFGLCRICLRELAHKGQLPGVRKASW
General information:
TITO was launched using:
RESULT:
Template:
4YHH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12094 for 235 contacts (-51.5/contact) +
2D Compatibility (PS) -4295 + (NN) -940 + (LL) 3496
1D Compatibility (HY) -3200 + (ID) 1050
Total energy: -18083.0 ( -76.95 by residue)
QMean score : 0.591
(partial model without unconserved sides chains):
PDB file :
Tito_4YHH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4YHH-query.scw
PDB file :
Tito_Scwrl_4YHH.pdb
: