Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKERELRRTMAVFPIGTVMKLTDLTARQIRYYEDQGLITPERTEGNRRMFSLNDMDRLLEIKDFISDGLHISDIKNEYMQRQHKSKEKQKSLSDAEVRRLLQDELRNQGRFSSPSQHIGNMHL
4R4E Chain:A ((5-74))
-----IRRSMPLFPIGIVMQLTELSARQIRYYEENGLIFPARTEGNRRLFSFHDVDKLLEIKHLIEQGVNMAGIKQILAKAEAE---------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4R4E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33334 for 447 contacts (-74.6/contact) +
2D Compatibility (PS) -7349 + (NN) -1192 + (LL) 3104
1D Compatibility (HY) -10400 + (ID) 2200
Total energy: -51371.0 ( -114.92 by residue)
QMean score : 0.517
(partial model without unconserved sides chains):
PDB file :
Tito_4R4E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4R4E-query.scw
PDB file :
Tito_Scwrl_4R4E.pdb
: