Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKAISFQNVTKSFGPKKILNNVSFDLEENMIYGFVGPNGAGKTTTIKMILGLLKFDTGFITIFGKKVNFGRT--DTNQLIGYLPDVPEYYDYMTALEYLDLCSGLAR--SKHKLSNK--ELLRSVGLDDNHQKI-ATYSRGMKQRLGLAQALVHDPKIIICDEPTSALDPKGRQDILDIISNL-RGEKTVIFSTHILSDVEKICDHVLVLTKCGIYSLEELKGKKSEENYSVRILIKVTKSEAKVLSHNYQIEKKDNEYALTLKGSKMDNKADLLAGFYQDLVSLKISPSAIEVIDNSLEELYLEVTK |
| 4U02 Chain:D ((5-211)) | ---IRIRNLHKWFGPLHVLKGIHLEVAPGEKLVIIGPSGSGKSTLIRTINRLEDFQEGEVVVDGLSVKDDRALREIRREVGMVFQQFNLFPHMTVLENVTLAPMRVRRWPREKAEKKALELLERVGILDQARKYPAQLSGGQQQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLDVMRDLAQGGMTMVVVTHEMGFAREVADRVVFMDGGQIVEEGRPEEIFTRPKEERTRSFLQRVLH------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U02.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139488 for 1578 contacts (-88.4/contact) +
2D Compatibility (PS) -21490 + (NN) -5314 + (LL) 5108
1D Compatibility (HY) -14400 + (ID) 3300
Total energy: -178884.0 ( -113.36 by residue)
QMean score : 0.552
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